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Protein Overview: PLCD1_ARATH

General Information:
Name(s) found: PLCD1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 561 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to cold [IEP]
    abscisic acid mediated signaling pathway [TAS]
    response to abscisic acid stimulus [IMP]
    response to salt stress [IEP]
    signal transduction [ISS]
    response to water deprivation [IEP]
    Molecular Function: phospholipase C activity [IDA][ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKESFKVCFC CVRNFKVKSS EPPEEIKNLF HDYSQDDRMS ADEMLRFVIQ VQGETHADIN  60
   61 YVKDIFHRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLPLT REVWQDMNQP LSHYFLYTGH 120
  121 NSYLTGNQLN SNSSIEPIVK ALRNGVRVIE LDLWPNSSGK EAEVRHGGTL TSREDLQKCL 180
  181 NVVKENAFQV SAYPVVLTLE DHLTPILQKK VAKMVSKTFG GSLFQCTDET TECFPSPESL 240
  241 KNKILISTKP PKEYLQTQIS KGSTTDESTR AKKISDAEEQ VQEEDEESVA IEYRDLISIH 300
  301 AGNRKGGLKN CLNGDPNRVI RLSMSEQWLE TLAKTRGPDL VKFTQRNLLR IFPKTTRFDS 360
  361 SNYDPLVGWI HGAQMVAFNM QSHGRYLWMM QGMFKANGGC GYVKKPDVLL SNGPEGEIFD 420
  421 PCSQNLPIKT TLKVKIYTGE GWNMDFPLDH FDRYSPPDFY AKVGIAGVPL DTASYRTEID 480
  481 KDEWFPIWDK EFEFPLRVPE LSLLCITVKD YDSNTQNDFA GQTCFPLSEV RPGIRAVRLH 540
  541 DRAGEVYKHV RLLMRFVLEP R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..561] PSI-BLAST 150.0 Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phospholipase C activity
    		•  1.68837208308012 bayes_pls_golite062009
  • hydrolase activity
    		•  1.21781019708396 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  1.06268977958067 bayes_pls_golite062009
  • catalytic activity
    		•  1.05111689766686 bayes_pls_golite062009
  • phospholipase activity
    		•  0.87334512532594 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.539550637107889 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.49944935937406 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.486374653947972 bayes_pls_golite062009
  • lipase activity
    		•  0.46273678058621 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.273676921589143 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.266794283648202 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0724768101463518 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle