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Protein Overview: gi|20197010, gi|...

General Information:
Name(s) found: gi|87116626 [NCBI NR]
gi|20197010 [NCBI NR]
gi|18399026 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|87116626|gb|ABD19677.1| At2g19385 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197010|gb|AAM14872.1| Expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18399026|ref|NP_565451.1| zinc ion binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWFQCEDCG ESLKKPKVPS HFKMCRANKL SCIDCGEMFG RDTVQGHNQC ITEAEKYGPK  60
   61 GQSKSANGTP AKPKDISKQE PDFDINVGLS NRYPWFCSLC NTKATSQQTL LAHADGKKHR 120
  121 GKAKAFHARQ QQEQSTTLDN KDGSENASNV DSEQKKVDLP ASSGVANGES HPEKKRKLET 180
  181 LDETSEGEEA KGSDLKKAKK QDHEKKINWK KLITSALKSN EDKTLKMKKL KKLVLESIVD 240
  241 SGRDKSELKA ELELKVNLSS RFTVDGKYVK LVAKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 28.221849 Solution structure of the N-terminal zinc finger domain of mouse cell growth regulating nucleolar protein LYAR
    2 View Details [81..199] FFAS03 2.1 Solution Structure of a Human C2H2-type Zinc Finger Protein
    3 View Details [200..275] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.414217765611205 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle