| Protein: | gi|20197010, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 275 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197010, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
332.0 | [0..1] | [275..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MVWFQCEDCG ESLKKPKVPS HFKMCRANKL SCIDCGEMFG RDTVQGHNQC ITEAEKYGPK 60
61 GQSKSANGTP AKPKDISKQE
|
| Detection Method: |  |
| Confidence: | 28.221849 |
| Match: | 1wjvA |
| Description: | Solution structure of the N-terminal zinc finger domain of mouse cell growth regulating nucleolar protein LYAR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [81-199] |
1 11 21 31 41 51
| | | | | |
1 PDFDINVGLS NRYPWFCSLC NTKATSQQTL LAHADGKKHR GKAKAFHARQ QQEQSTTLDN 60
61 KDGSENASNV DSEQKKVDLP ASSGVANGES HPEKKRKLET LDETSEGEEA KGSDLKKAK
|
| Detection Method: | |
| Confidence: | 2.1 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.304205134456748 | bayes_pls_golite062009 |
|
Region A: Residues: [200-275] |
1 11 21 31 41 51
| | | | | |
1 KQDHEKKINW KKLITSALKS NEDKTLKMKK LKKLVLESIV DSGRDKSELK AELELKVNLS 60
61 SRFTVDGKYV KLVAKD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
