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Protein Overview: ATPD_ARATH

General Information:
Name(s) found: ATPD_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • ATP synthase subunit delta, chloroplastic OS=Arabidopsis thaliana GN=ATPD PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    stromule [IDA]
    membrane [IDA]
    chloroplast envelope [IDA]
    plastoglobule [IDA]
    thylakoid [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: response to cold [IEP]
    photosynthetic electron transport in photosystem II [IMP]
    photosynthesis [IMP]
    photosynthetic electron transport in photosystem I [IMP]
    defense response to bacterium [IEP]
    Molecular Function: proton-transporting ATPase activity, rotational mechanism [IEA]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLQQTLFS LQSKLPPSSF QIARSLPLRK TFPIRINNGG NAAGARMSAT AASSYAMALA  60
   61 DVAKRNDTME LTVTDIEKLE QVFSDPQVLN FFANPTITVE KKRQVIDDIV KSSSLQSHTS 120
  121 NFLNVLVDAN RINIVTEIVK EFELVYNKLT DTQLAEVRSV VKLEAPQLAQ IAKQVQKLTG 180
  181 AKNVRVKTVI DASLVAGFTI RYGESGSKLI DMSVKKQLED IASQLELGEI QLAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] PSI-BLAST 25.69897 N-TERMINAL DOMAIN OF THE DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI, NMR, MINIMIZED AVERAGE STRUCTURE
    2 View Details [181..234] MSA 1.328994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle