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Protein Overview: UBC23_ARATH

General Information:
Name(s) found: UBC23_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75315951|sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin carrier protein E2 23 [NCBI NR]
  • gi|3757521|gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidopsis thaliana] [NCBI NR]
  • pir||H84545 probable ubiquitin-conjugating enzyme [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227320|ref|NP_179284.1| UBC23 (UBIQUITIN-CONJUGATING ENZYME 23); small conjugating protein ligase/ ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
  • Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=1 SV=1 [Swiss-Prot]
  • (Q9ZVX1) Putative ubiquitin-conjugating enzyme E2 (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) [athaliana3702.FASTAC.txt]
  • putative ubiquitin-conjugating enzyme [Arabidopsis thaliana]gi|25411753|pir||H84545 probable ubiquitin-conjugating enzyme [imported] - Arabidopsis thalianagi|15227320|ref|NP_179284.1| ubiquitin-conjugating enzyme family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ubiquitin-conjugating enzyme family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: UBC23, PFU2 | PFU2/UBC23 (UBIQUITIN-CONJUGATING ENZYME 23); ubiquitin-protein ligase | chr2:7341641-7345909 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ubiquitin-conjugating enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzyme 23 | chr2:7334559-7338827 REVERSE LENGTH=1102 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=3 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1102 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of protein metabolic process [IEA]
    post-translational protein modification [IEA]
    Molecular Function: ubiquitin-protein ligase activity [ISS]
    small conjugating protein ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD  60
   61 SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN GDGEKKADGN YKCGALEGDQ 120
  121 IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI 180
  181 HKDISTKNLK RVRDFAVGDY VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI 240
  241 PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA 300
  301 SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL 360
  361 YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT SDDPPQRNPS VSKEPVHEPW 420
  421 PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE 480
  481 TPGDHEFVSE QYVVEKTSDD GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF 540
  541 EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH 600
  601 QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD 660
  661 DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI EGNSDADIYA ENDSGRNGAL 720
  721 ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK 780
  781 VNVTDNCESK GTQANAKNIL SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG 840
  841 VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF 900
  901 FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ 960
  961 VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN TFLLNCKTMM YLMRKPPKDF1020
 1021 EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP1080
 1081 KLFSALSEVG ADCNEFQHLQ QQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] deduced N/A No confident structure predictions are available.
    2 View Details [267..379] deduced N/A No confident structure predictions are available.
    3 View Details [380..445] deduced N/A No confident structure predictions are available.
    4 View Details [446..667] deduced N/A No confident structure predictions are available.
    5 View Details [668..799] deduced N/A No confident structure predictions are available.
    6 View Details [800..1102] PSI-BLAST 45.522879 No description for 3cegA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle