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Protein Overview: gi|6730713, gi|4...

General Information:
Name(s) found: gi|6730713 [NCBI NR]
gi|41619112 [NCBI NR]
gi|25294089 [NCBI NR]
gi|21386989 [NCBI NR]
gi|17473832 [NCBI NR]
gi|15221853 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|6730713|gb|AAF27108.1|AC011809_17 Putative MYB47 transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|41619112|gb|AAS10026.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||H86320 probable MYB47 transcription factor [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21386989|gb|AAM47898.1| Putative MYB47 transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|17473832|gb|AAL38342.1| Putative MYB47 transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15221853|ref|NP_173306.1| AtMYB47 (myb domain protein 47); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: response to salt stress [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to jasmonic acid stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRTTWFDVD GMKKGEWTAE EDQKLGAYIN EHGVCDWRSL PKRAGLQRCG KSCRLRWLNY  60
   61 LKPGIRRGKF TPQEEEEIIQ LHAVLGNRWA AMAKKMQNRT DNDIKNHWNS CLKKRLSRKG 120
  121 IDPMTHEPII KHLTVNTTNA DCGNSSTTTS PSTTESSPSS GSSRLLNKLA AGISSRQHSL 180
  181 DRIKYILSNS IIESSDQAKE EEEKEEEEEE RDSMMGQKID GSEGEDIQIW GEEEVRRLME 240
  241 IDAMDMYEMT SYDAVMYESS HILDHLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 32.30103 CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES
    2 View Details [119..267] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle