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Protein Overview: gi|15223738, gi|...

General Information:
Name(s) found: gi|25372877 [NCBI NR]
gi|17065592 [NCBI NR]
gi|15223738 [NCBI NR]
gi|14334848 [NCBI NR]
gi|12320782 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • pir||B96548 probable proline-rich protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|17065592|gb|AAL33774.1| putative proline-rich protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15223738|ref|NP_175520.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14334848|gb|AAK59602.1| putative proline-rich protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12320782|gb|AAG50537.1|AC079828_8 proline-rich protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 171 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: defense response to fungus [IEP]
    Molecular Function: metal ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKVVMMKL KVDLNCSKCY KKVKKAIRKF PQITDELFDE KSNTIIIKVV CYDPERLMNK  60
   61 LCYKGDGSIK SIVILEPPKP PQPQPQPPQK PTAPAPAPAQ AQAPALVRPA PVPVLVSSSA 120
  121 PQPMPMWQPY HCGPYYEAQQ YQCYGRPVYE SWGGGRQCCH EDMNSQGCSI M

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..171] PSI-BLAST 6.045757 Copper chaperone for superoxide dismutase, C-terminal domain; Copper chaperone for superoxide dismutase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle