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Protein Overview: gi|15231461, gi|...

General Information:
Name(s) found: gi|6041840 [NCBI NR]
gi|15231461 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|6041840|gb|AAF02149.1|AC009853_9 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231461|ref|NP_187396.1| lipase class 3 family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1003 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: lipid metabolic process [IEA][ISS]
    Molecular Function: triglyceride lipase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESIQSRVES WIRDQRARFL RVSWGPIQWR FRWPPWNGGD ADQRIKIRRE YEKRKKQIED  60
   61 LCLALKSESV EDLQDILCCM VLSECVYKRP ASEMVRAVNK FKADFGGQFI SLERVQPSSD 120
  121 HVPHRYLLAE AGDTLFASFV GTRQYKDIMA DANILQGHIF HDDVAEDECI EASEPIQSEP 180
  181 LKNNGEGLRN PKQLRQKPKP AAHRGFLARA KGIPALELYR LAQKKKRKLV LCGHSLGGAV 240
  241 AALATLAILR VVAASSKRGN ENIHVKCITF SQPPVGNAAL RDYVHEKGWH HYFKSYCIPE 300
  301 DLVPRILSPA YFHHYNEQRI SMAGETEATN GQGVTSEAEK RKTKEHEQLV IGVGPVQNSF 360
  361 WRLSKLVPLE AVKKQLDRYI GKKEDPAETS TANESAVLAP IRDVVIEPQS LEIEEGKDGI 420
  421 SLKPLPDAGN GPTVSGRSGG KTNSPNGFRV PYLPSYVPFG ELYLLGTASV ESLSEGEYSK 480
  481 LTSVRSVITE LRERLQSHSM KSYRSRFQRI HDLCMDVDGF FGVDQQKQFP HLQQWLGLAV 540
  541 GGSIELGHIV ESPVIRTATS IAPLGWKGVP GDKNAELLKV DITGFGLHLC SFVHAQVNGN 600
  601 WCSTTVESFP TTPAYSSDNV EQTELQKIRV VIGAPLKRPP SNQIVEDPLV PMFSSVDSKT 660
  661 GFPKEGINLG FFQEDKFVRP EGLEDLYIFC TSDFATVAKE VEVRTRRVRL LGLEGAGKTS 720
  721 LFRAILGQSM LSSMTHVENL QIQSDVQECI IGGVCYSDTV GVNLQELHLE ASRFREELWK 780
  781 GVRNLSKKID LIILVHNLSH RIPRYQNSTT LLQQQQPALA LLLDEVKSLG IPWVLAITNK 840
  841 FSVSAHQQKS AIEAVLQAYQ ASPNTTGIVN SIPYIISGSG TSSLPWAAVN AGNDGSVGVP 900
  901 KMIFAPLDLV KKPFQRKDTV FPVDGVNSLC ELVHRVLQTQ EEACFEELAR DRLLVELAKD 960
  961 RVVDGSQAKS SSMSAAAVGA SLGAGLGLVL AVVMGAGSAL RKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..366] PSI-BLAST 49.30103 Triacylglycerol lipase
    2 View Details [367..438] deduced N/A No confident structure predictions are available.
    3 View Details [439..671] deduced N/A No confident structure predictions are available.
    4 View Details [672..898] FFAS03 1.0 No description for 2gedA was found.
    5 View Details [899..1003] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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