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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15231461, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESIQSRVES WIRDQRARFL RVSWGPIQWR FRWPPWNGGD ADQRIKIRRE YEKRKKQIED  60
   61 LCLALKSESV EDLQDILCCM VLSECVYKRP ASEMVRAVNK FKADFGGQFI SLERVQPSSD 120
  121 HVPHRYLLAE AGDTLFASFV GTRQYKDIMA DANILQGHIF HDDVAEDECI EASEPIQSEP 180
  181 LKNNGEGLRN PKQLRQKPKP AAHRGFLARA KGIPALELYR LAQKKKRKLV LCGHSLGGAV 240
  241 AALATLAILR VVAASSKRGN ENIHVKCITF SQPPVGNAAL RDYVHEKGWH HYFKSYCIPE 300
  301 DLVPRILSPA YFHHYNEQRI SMAGETEATN GQGVTSEAEK RKTKEHEQLV IGVGPVQNSF 360
  361 WRLSKLVPLE AVKKQLDRYI GKKEDPAETS TANESAVLAP IRDVVIEPQS LEIEEGKDGI 420
  421 SLKPLPDAGN GPTVSGRSGG KTNSPNGFRV PYLPSYVPFG ELYLLGTASV ESLSEGEYSK 480
  481 LTSVRSVITE LRERLQSHSM KSYRSRFQRI HDLCMDVDGF FGVDQQKQFP HLQQWLGLAV 540
  541 GGSIELGHIV ESPVIRTATS IAPLGWKGVP GDKNAELLKV DITGFGLHLC SFVHAQVNGN 600
  601 WCSTTVESFP TTPAYSSDNV EQTELQKIRV VIGAPLKRPP SNQIVEDPLV PMFSSVDSKT 660
  661 GFPKEGINLG FFQEDKFVRP EGLEDLYIFC TSDFATVAKE VEVRTRRVRL LGLEGAGKTS 720
  721 LFRAILGQSM LSSMTHVENL QIQSDVQECI IGGVCYSDTV GVNLQELHLE ASRFREELWK 780
  781 GVRNLSKKID LIILVHNLSH RIPRYQNSTT LLQQQQPALA LLLDEVKSLG IPWVLAITNK 840
  841 FSVSAHQQKS AIEAVLQAYQ ASPNTTGIVN SIPYIISGSG TSSLPWAAVN AGNDGSVGVP 900
  901 KMIFAPLDLV KKPFQRKDTV FPVDGVNSLC ELVHRVLQTQ EEACFEELAR DRLLVELAKD 960
  961 RVVDGSQAKS SSMSAAAVGA SLGAGLGLVL AVVMGAGSAL RKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle