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Protein Overview: GATL1_ARATH

General Information:
Name(s) found: GATL1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|94442445|gb|ABF19010.1| At1g19300 [Arabidopsis thaliana] [NCBI NR]
  • gi|8778448|gb|AAF79456.1|AC025808_38 F18O14.2 [Arabidopsis thaliana] [NCBI NR]
  • gi|18394719|ref|NP_564077.1| PARVUS (PARVUS); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] [NCBI NR]
  • gi|15983452|gb|AAL11594.1|AF424600_1 At1g19300/F18O14_13 [Arabidopsis thaliana] [NCBI NR]
  • Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana GN=GATL1 PE=2 SV=1 [Swiss-Prot]
  • (Q9LN68) F18O14.2 (AT1G19300/F18O14_13) [athaliana3702.FASTAC.txt]
  • At1g19300/F18O14_13 [Arabidopsis thaliana]gi|8778448|gb|AAF79456.1| F18O14.2 [Arabidopsis thaliana]gi|18394719|ref|NP_564077.1| glycosyl transferase family 8 protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Glycosyl transferase family 8 protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GATL1, PARVUS, GLZ1 | GATL1/GLZ1/PARVUS (GALACTURONOSYLTRANSFERASE-LIKE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr1:6671442-6672497 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g19300/F18O14_13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • F18O14.2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g19300 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GATL1, PARVUS, GLZ1, ATGATL1 | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:6671451-6672506 REVERSE LENGTH=351 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDA]
    Biological Process: multicellular organism reproduction [IMP]
    glucuronoxylan biosynthetic process [IMP]
    cell wall thickening [IMP]
    carbohydrate biosynthetic process [ISS]
    xylem and phloem pattern formation [IMP]
    leaf development [IMP]
    Molecular Function: transferase activity, transferring glycosyl groups [ISS]
    polygalacturonate 4-alpha-galacturonosyltransferase activity [ISS]
    transferase activity, transferring hexosyl groups [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHLLLLIL LSLLLLHKPI SATTIIQKFK EAPQFYNSAD CPLIDDSESD DDVVAKPIFC  60
   61 SRRAVHVAMT LDAAYIRGSV AAVLSVLQHS SCPENIVFHF VASASADASS LRATISSSFP 120
  121 YLDFTVYVFN VSSVSRLISS SIRSALDCPL NYARSYLADL LPPCVRRVVY LDSDLILVDD 180
  181 IAKLAATDLG RDSVLAAPEY CNANFTSYFT STFWSNPTLS LTFADRKACY FNTGVMVIDL 240
  241 SRWREGAYTS RIEEWMAMQK RMRIYELGSL PPFLLVFAGL IKPVNHRWNQ HGLGGDNFRG 300
  301 LCRDLHPGPV SLLHWSGKGK PWARLDAGRP CPLDALWAPY DLLQTPFALD S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] PSI-BLAST 37.09691 apo form of a mutant of glycogenin in which Asp159 is replaced by Ser

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.3567084433464 bayes_pls_golite062009
  • transferase activity
    		•  1.04375515050786 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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