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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GATL1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHLLLLIL LSLLLLHKPI SATTIIQKFK EAPQFYNSAD CPLIDDSESD DDVVAKPIFC  60
   61 SRRAVHVAMT LDAAYIRGSV AAVLSVLQHS SCPENIVFHF VASASADASS LRATISSSFP 120
  121 YLDFTVYVFN VSSVSRLISS SIRSALDCPL NYARSYLADL LPPCVRRVVY LDSDLILVDD 180
  181 IAKLAATDLG RDSVLAAPEY CNANFTSYFT STFWSNPTLS LTFADRKACY FNTGVMVIDL 240
  241 SRWREGAYTS RIEEWMAMQK RMRIYELGSL PPFLLVFAGL IKPVNHRWNQ HGLGGDNFRG 300
  301 LCRDLHPGPV SLLHWSGKGK PWARLDAGRP CPLDALWAPY DLLQTPFALD S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle