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Protein Overview: GH36_ARATH

General Information:
Name(s) found: GH36_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytoplasm [ISS]
    Biological Process: unidimensional cell growth [IMP]
    auxin homeostasis [TAS]
    auxin mediated signaling pathway [IMP]
    response to auxin stimulus [IMP][ISS]
    Molecular Function: indole-3-acetic acid amido synthetase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEAPKIAAL EVSDESLAEK NKNKLQFIED VTTNADDVQR RVLEEILSRN ADVEYLKRHG  60
   61 LEGRTDRETF KHIMPVVTYE DIQPEINRIA NGDKSQVLCS NPISEFLTSS GTSGGERKLM 120
  121 PTIEEELDRR SLLYSLLMPV MDQFVPGLDK GKGMYFLFIK SESKTPGGLP ARPVLTSYYK 180
  181 SSHFKNRPYD PYTNYTSPNQ TILCSDSYQS MYSQMLCGLC QHKEVLRVGA VFASGFIRAI 240
  241 KFLEKHWPEL ARDIRTGTLS SEITDSSVRE AVGEILKPDP KLADFVESEC RKTSWQGIIT 300
  301 RLWPNTKYVD VIVTGTMSQY IPTLDYYSNG LPLVCTMYAS SECYFGVNLR PLCKPSEVSY 360
  361 TLIPNMAYFE FLPVHRNSGV TSSISLPKAL TEKEQQELVD LVDVKLGQEY ELVVTTYAGL 420
  421 YRYRVGDVLS VAGFKNNAPQ FSFICRKNVV LSIDSDKTDE VELQNAVKNA VTHLVPFDAS 480
  481 LSEYTSYADT SSIPGHYVLF WELCLNGNTP IPPSVFEDCC LTIEESLNSV YRQGRVSDKS 540
  541 IGPLEIKMVE SGTFDKLMDY AISLGASINQ YKTPRCVKFA PIIELLNSRV VDSYFSPKCP 600
  601 KWSPGHKQWG SN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..612] FFAS03 0.963 Phenylalanine activating domain of gramicidin synthetase 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.927181813624701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle