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Protein Overview: CRS2A_ARATH

General Information:
Name(s) found: CRS2A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9758861|dbj|BAB09443.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|90962962|gb|ABE02405.1| At5g38290 [Arabidopsis thaliana] [NCBI NR]
  • gi|75309164|sp|Q9FKN4.1|CRS2A_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic; AltName: Full=Chloroplastic RNA splicing factor 2-A; AltName: Full=CRS2-like protein A; Flags: Precursor [NCBI NR]
  • gi|15240875|ref|NP_198645.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] [NCBI NR]
  • Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1 [Swiss-Prot]
  • (Q9FKN4) Similarity to peptidyl-tRNA hydrolase [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15240875|ref|NP_198645.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Peptidyl-tRNA hydrolase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | peptidyl-tRNA hydrolase family protein | chr5:15320833-15322611 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g38290 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • aminoacyl-tRNA hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:15303603-15305381 FORWARD LENGTH=246 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 246 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: aminoacyl-tRNA hydrolase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCASSSPIT SPLYPKAYKF SQTKSNSKRF SSLRASLPVS DNKLLKFEYT PWLIVGLGNP  60
   61 GLKYYGTRHN IGFEMIDHIA RATDISMNTI QSKALVGIGS VGEVPILLVK PQGYMNFSGE 120
  121 SVGPLAAYYQ IPLRHILMIY DDMGLSNGVL RLQPKGGHSQ HNGLKNVTEH LNGCRGYPRL 180
  181 SIGIGNPPGN MDMKAFLLQK FSPLERKQMD EGLEQGVEGV KTLVEEGFSD SISRFNLGQK 240
  241 YKFHKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..246] PSI-BLAST 72.522879 Structure of the Group II Intron Splicing Factor CRS2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminoacyl-tRNA hydrolase activity
    		•  2.30458185525664 bayes_pls_golite062009
  • catalytic activity
    		•  1.41033217274476 bayes_pls_golite062009
  • binding
    		•  1.31642757964381 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.904773408466145 bayes_pls_golite062009
  • protein binding
    		•  0.606551407946731 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle