YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CRS2A_ARATH
Organism: Arabidopsis thaliana
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRS2A_ARATH.

Description E-value Query
Range
Subject
Range
gi|42573527 - gi|42573527|ref|NP_974860.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
332.0 [0..1] [246..5]

Back

Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCASSSPIT SPLYPKAYKF SQTKSNSKRF SSLRASLPVS DNKLLKFEYT PWLIVGLGNP  60
   61 GLKYYGTRHN IGFEMIDHIA RATDISMNTI QSKALVGIGS VGEVPILLVK PQGYMNFSGE 120
  121 SVGPLAAYYQ IPLRHILMIY DDMGLSNGVL RLQPKGGHSQ HNGLKNVTEH LNGCRGYPRL 180
  181 SIGIGNPPGN MDMKAFLLQK FSPLERKQMD EGLEQGVEGV KTLVEEGFSD SISRFNLGQK 240
  241 YKFHKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 1rymA
Description: Structure of the Group II Intron Splicing Factor CRS2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aminoacyl-tRNA hydrolase activity 2.30458185525664 bayes_pls_golite062009
catalytic activity 1.41033217274476 bayes_pls_golite062009
binding 1.31642757964381 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.904773408466145 bayes_pls_golite062009
protein binding 0.606551407946731 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle