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Protein Overview: gi|42573527

General Information:
Name(s) found: gi|42573527 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|42573527|ref|NP_974860.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTAMFCASS SPITSPLYPK AYKFSQTKSN SKRFSSLRAS LPVSDNKLLK FEYTPWLIVG  60
   61 LGNPGLKYYG TRHNIGFEMI DHIARATDIS MNTIQSKALV GIGSVGEVPI LLVKPQGYMN 120
  121 FSGESVGPLA AYYQIPLRHI LMIYDDMGLS NGVLRLQPKG GHSQHNGLKN VTEHLNGCRG 180
  181 YPRLSIGIGN PPGNMDMKAF LLQKFSPLER KQMDEGLEQG VEGVKTLVEE GFSDSISRFN 240
  241 LGQKYKFHKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 73.522879 Structure of the Group II Intron Splicing Factor CRS2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminoacyl-tRNA hydrolase activity
    		•  2.30458185525664 bayes_pls_golite062009
  • catalytic activity
    		•  1.41033217274476 bayes_pls_golite062009
  • binding
    		•  1.31642757964381 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.904773408466145 bayes_pls_golite062009
  • protein binding
    		•  0.606551407946731 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle