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Protein Overview: CID7_ARATH

General Information:
Name(s) found: CID7_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana GN=CID7 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 567 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: mismatch repair [ISS]
    Molecular Function: ATP binding [ISS]
    protein binding [IPI]
    damaged DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTKKASEP KLSGTSIKPT TLNPHAAEFV PFTLRSPSSG GTSTLDTRLL ASSSSVGKAV  60
   61 LDRTESSASH HSDEEARQFW SHQLPDDITP DFGLMTQDDN SYGSGSLSLA NLSLFDGNEA 120
  121 EKFPSASGGY GFSDQTGLAS HNANGNSLAD KSRYPISSFG EDPQRQSFMQ LSPKPWDKQI 180
  181 MNAEQLLGND RERNPFSGKS RHGFVNDMIT ESPGDMEVNP VDFLASQFPG FAAESLAEVY 240
  241 FANGCDLQLT IEMLTQLELQ VDGGLNQNIS PKTYAPPSLT PMDFPALSIS NSHGIPAQFG 300
  301 GDDLQQTGNH YQSPEKDNMF FFKSGPSVSQ PGAIDYVSAV RKLASQDSGM WKYERNDSAD 360
  361 SSIGSSRNSG AYKSGRGRSI YSDKLQSRAQ TRPAPVWVET GDAVGNMYSE LREEARDYAR 420
  421 LRNVYFEQAR QAYLVGNKAL AKELSVKGQL HNMQMKAAHG KAQEAIYRQR NPVGQGNSRG 480
  481 NERMIDLHGL HVSEALQVLK HELSVLRSTA RATQERLQIY ICVGTGHHTR GSRTPARLPV 540
  541 AVQRYLLEEE GLDYSEPQAG LLRVIIY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] deduced N/A No confident structure predictions are available.
    2 View Details [195..254] MSA 2.023984 View MSA. No confident structure predictions are available.
    3 View Details [255..377] deduced N/A No confident structure predictions are available.
    4 View Details [378..475] Pfam 16.124939 No description for PF08590.1 was found. No confident structure predictions are available.
    5 View Details [476..567] PSI-BLAST 25.39794 No description for 2d9iA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle