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Protein Overview: glb-25

General Information:
Name(s) found: glb-25 / CE40778 [WormBase]
Description(s) found:
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  • WBGene00020279 locus:glb-25 status:Confirmed UniProt:G5EGB6 protein_id:CCD74219.1 [WormBase]
  • gi|193208621|ref|NP_503535.2| GLoBin family member (glb-25) [Caenorhabditis elegans] [NCBI NR]
  • gi|129772243|gb|ABO31385.1| globin [Caenorhabditis elegans] [NCBI NR]
  • gi|126541610|gb|ABO16459.1| Hypothetical protein T06A1.4 [Caenorhabditis elegans] [NCBI NR]
  • CE40778 WBGene00020279 locus:glb-25 status:Confirmed UniProt:A3KFE5_CAEEL protein_id:ABO16459.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40778 WBGene00020279 locus:glb-25 status:Confirmed UniProt:A3KFE5_CAEEL protein_id:ABO16459.1| [wormORF-contam.fasta]
  • CE40778 WBGene00020279 status:Predicted TR:A3KFE5 protein_id:ABO16459.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40778 WBGene00020279 locus:glb-25 status:Confirmed UniProt:A3KFE5 protein_id:ABO16459.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE40778 WBGene00020279 locus:glb-25 status:Confirmed UniProt:G5EGB6 protein_id:CCD74219.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of A0A0K3AV45, GLoBin related OS=Caenorhabditis elegans GN=glb-25 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxygen transport [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    Molecular Function: oxygen binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFKKLRKN KDKNLPLPEP EAVKPLDKRI GIDSYRDFFT LKNWWKSVDR KRVEASTYMF  60
   61 SKYLNDFPQN KDLYLKLKNV NAQTVDMNCS DPGFEAIAAQ YLKVFDDVIT AVEEKPGDVQ 120
  121 TACDRLQAVG KMHRQKVSGM DGTMFQNMEE PFIQMVSHIL QDRFNEKAEM LYRKFFQFCL 180
  181 KYLLEGFNG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] FFAS03 5.61 AMINO ACID SEQUENCE OF A GLOBIN FROM THE SEA CUCUMBER CAUDINA (MOLPADIA) ARENICOLA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.507012591235093 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle