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Protein Overview: gi|7487019, gi|3...

General Information:
Name(s) found: gi|7487019 [NCBI NR]
gi|7268217 [NCBI NR]
gi|3859608 [NCBI NR]
gi|15234286 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • pir||T02001 hypothetical protein T15B16.10 - Arabidopsis thaliana [NCBI NR]
  • gi|7268217|emb|CAB77744.1| putative CHP-rich zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|3859608|gb|AAC72874.1| T15B16.10 gene product [Arabidopsis thaliana] [NCBI NR]
  • gi|15234286|ref|NP_192083.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 652 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSEGVLMPL IHKHRMMPWN DLRRGDCCGR FESICDGYYC KICDIFVHKK CGESSEYIEH  60
   61 PSHPNHTLQL LSTRGNSHDC DLCGKNIGDL FYRCEICDFD MDLYCAKYPP PEVINISKTH 120
  121 HHKLNLLKEL IQFDYCVWHP PEVNHTLEVN HSYHSLHPLK LHTGQLPNYS DRKCRLCAKE 180
  181 IEVGLFYHCS LCNFTLDMSC VLNPPQRYLW NLKAHDHQLT LLPSLRSFLC SACGLNGDRS 240
  241 PYICVQCDFM IHQVCLHLPR VININRHDHR VSRTSVLGVV NSVCGVCRQK VDWTCGGFSC 300
  301 PRCPGYAAHS LCATREDVWN GKELEGVPEE IEDIEPYVVI DDNTIQHFSH KEHYLRLHVN 360
  361 SVLCDDNKRC SACTHPICLQ SFYGCMDCDF ILHQNCAGFL RMKWHVLHNE RLTLVTNETE 420
  421 VFKCYACERW SNGFRYQQGY KSFDVRCGSI SEPFFHPSHP DHPLYCILPY GKIFCNGCYK 480
  481 FKYGMLVCVE YECNHLICFN CATLPPVVKH RVDDHPLSLC YGEKASGICW CDICEAKADP 540
  541 EIWFYTCKDQ RASLHTSCVL GDFSGLMPGS TLKSASNSSE VLLNNIVSRP FCSFLELMPG 600
  601 STLESAGKSV EVGLNKSTSR PFCISCKLHC IFPIILKRLG TSDEYFCSIL CI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] FFAS03 2.18 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [120..347] MSA 13.169993 View MSA. No confident structure predictions are available.
    3 View Details [348..462] deduced N/A No confident structure predictions are available.
    4 View Details [463..563] PSI-BLAST 3.522879 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    5 View Details [564..652] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle