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Protein Overview: gi|15240743, gi|...

General Information:
Name(s) found: gi|9757867 [NCBI NR]
gi|15240743 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9757867|dbj|BAB08454.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15240743|ref|NP_201547.1| glycosyl hydrolase family protein 17 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 380 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS  60
   61 SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS SDLVLSSLKN IYHSLTRWGL 120
  121 ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV 180
  181 EKLGSLSFNK VNFLNPEPEQ ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS 240
  241 SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV 300
  301 AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG 360
  361 GTAMLITTDP SYQHCRFVLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 75.221849 Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
    2 View Details [284..380] Pfam 49.79588 No description for PF07983.4 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle