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Protein Overview: PRB1_ARATH

General Information:
Name(s) found: PRB1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|3810602|gb|AAC69384.1| putative pathogenesis related-1 (PR1) protein [Arabidopsis thaliana] [NCBI NR]
  • pir||H84518 pathogenesis-related PR-1-like protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20197518|gb|AAM15107.1| putative pathogenesis related-1 (PR1) protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15225965|ref|NP_179064.1| ATPRB1 [Arabidopsis thaliana] [NCBI NR]
  • Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1 [Swiss-Prot]
  • (Q9ZNS4) Pathogenesis-related PR-1-like protein (Putative pathogenesis related-1 (PR1) protein) [athaliana3702.FASTAC.txt]
  • putative pathogenesis related-1 (PR1) protein [Arabidopsis thaliana]gi|3810602|gb|AAC69384.1| putative pathogenesis related-1 (PR1) protein [Arabidopsis thaliana]gi|15225965|ref|NP_179064.1| pathogenesis-related protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pathogenesis-related protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATPRB1 | ATPRB1 (Arabidopsis thaliana basic pathogenesis-related protein 1) | chr2:6232785-6233270 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATPRB1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative pathogenesis related-1 (PR1) protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATPRB1, PRB1 | basic pathogenesis-related protein 1 | chr2:6225703-6226188 REVERSE LENGTH=161 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 161 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    extracellular region [IEA][ISS]
    Biological Process: response to jasmonic acid stimulus [IEP]
    response to salicylic acid stimulus [IEP]
    response to ethylene stimulus [IEP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVTSYSRIL IILAALVGAL VVPLKAQDSQ QDYVNAHNQA RSQIGVGPMQ WDEGLAAYAR  60
   61 NYANQLKGDC RLVHSRGPYG ENLAKSGGDL SGVAAVNLWV NEKANYNYDT NTCNGVCGHY 120
  121 TQVVWRNSVR LGCAKVRCNN GGTIISCNYD PPGNYANQKP Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] PSI-BLAST 37.0 P14A, NMR, 20 STRUCTURES


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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