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Protein Overview: RH33_ARATH

General Information:
Name(s) found: RH33_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75318697|sp|O80792.1|RH33_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 33 [NCBI NR]
  • gi|3327394|gb|AAC26676.1| putative RNA helicase [Arabidopsis thaliana] [NCBI NR]
  • pir||E84488 probable RNA helicase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15226161|ref|NP_178818.1| DEAD box RNA helicase, putative [Arabidopsis thaliana] [NCBI NR]
  • Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana GN=RH33 PE=3 SV=1 [Swiss-Prot]
  • (O80792) Putative ATP-dependent RNA helicase [athaliana3702.FASTAC.txt]
  • putative RNA helicase [Arabidopsis thaliana]gi|25411327|pir||E84488 probable RNA helicase [imported] - Arabidopsis thalianagi|15226161|ref|NP_178818.1| DEAD box RNA helicase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DEAD box RNA helicase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DEAD box RNA helicase, putative | chr2:3576480-3580393 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative RNA helicase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative DEAD-box ATP-dependent RNA helicase 33 [nr-271106-contam.fasta]
  • | Symbols: | DEA(D/H)-box RNA helicase family protein | chr2:3576483-3580396 FORWARD LENGTH=845 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 845 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMAMRLPAI SRAVTEVASS PVGLRRLFCS NASRFSFLSP PARRQAEPST NLFHSGLSKR  60
   61 ITSERSLWNR IFSRNMGGGP RTFPGGLNKW QWKRMHEKKA REKENKLLDQ EKQLYEARIR 120
  121 TEIRAKMWGH PDSGEKTAKL KQSHGPMSPK EHIKTLADRF MKAGADDLWN DNDGPVKKFD 180
  181 QGSRSCSDSI DSTPIDVRRL VSATCDSMGK HRVLDSSRRG FSSMSRFKRN ESSCDEGDDV 240
  241 DAKKLDTLSP FSPKFSGTKE KVKSSTSVVG VIRNKGLFGR RKFRKNDSST EEDSDEEGNE 300
  301 GKMIGWMDLR KTGSSASLGN HDIKLTKRVN RNVTDEELYP PLDINRVRED LSKKQSVDNV 360
  361 MEEKQEPHDS IYSAKRFDES CISPLTLKAL SASGIVKMTR VQDATLSECL DGKDALVKAK 420
  421 TGTGKSMAFL LPAIETVLKA MNSGKGVHKV APIFVLILCP TRELASQIAA EGKALLKNHD 480
  481 GIGVQTLIGG TRFRLDQQRL ESEPCQILIA TPGRLLDHIE NKSGLTSRLM ALKLFIVDEA 540
  541 DLLLDLGFKR DVEKIIDCLP RQRQSLLFSA TIPKEVRRVS QLVLKRDHSY IDTIGLGCVE 600
  601 THDKVKQSCI VAPHESHFHL VPHLLKEHIN NMPDYKIIVF CSTGMVTSLM YTLLREMKLN 660
  661 VREIHARKPQ LHRTCVSDEF KESNRLILVT SDVSARGMNY PDVTLVIQVG IPSDREQYIH 720
  721 RLGRTGREGK GGKGLLLIAP WERYFLDELK DLPLEPIPAP DLDSRVKHQV DQSMAKIDTS 780
  781 IKEAAYHAWL GYYNSVRETG RDKTTLAELA NRFCHSIGLE KPPALFRRTA VKMGLKGISG 840
  841 IPIRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..246] MSA 1.317992 View MSA. No confident structure predictions are available.
    2 View Details [247..331] deduced N/A No confident structure predictions are available.
    3 View Details [332..761] PSI-BLAST 88.221849 No description for 2db3A was found.
    4 View Details [762..845] PSI-BLAST 21.69897 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle