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Protein Overview: HMT1_ARATH

General Information:
Name(s) found: HMT1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9279594|dbj|BAB01052.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana] [NCBI NR]
  • gi|6685161|gb|AAF23821.1|AF219222_1 homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana] [NCBI NR]
  • gi|50400681|sp|Q9SDL7.1|HMT1_ARATH RecName: Full=Homocysteine S-methyltransferase 1; AltName: Full=S-methylmethionine:homocysteine methyltransferase 1; Short=SMM:Hcy S-methyltransferase 1; Short=AtHMT-1 [NCBI NR]
  • pir||T51941 homocysteine S-methyltransferase (EC 2.1.1.10) AtHMT-1 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20148551|gb|AAM10166.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana] [NCBI NR]
  • gi|17473823|gb|AAL38339.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230929|ref|NP_189219.1| HMT-1; homocysteine S-methyltransferase [Arabidopsis thaliana] [NCBI NR]
  • Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1 PE=1 SV=1 [Swiss-Prot]
  • (Q9SDL7) Homocysteine S-methyltransferase AtHMT-1 (EC 2.1.1.10) [athaliana3702.FASTAC.txt]
  • homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]gi|20148551|gb|AAM10166.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]gi|6685161|gb|AAF23821.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]gi|1747382 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Homocysteine S-methyltransferase 1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HMT-1, ATHMT-1 | ATHMT-1/HMT-1; homocysteine S-methyltransferase | chr3:9482201-9483921 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATHMT-1/HMT-1; homocysteine S-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Homocysteine S-methyltransferase 1 (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (AtHMT-1) [nr-271106-contam.fasta]
  • | Symbols: HMT-1, ATHMT-1 | Homocysteine S-methyltransferase family protein | chr3:9480964-9482684 FORWARD LENGTH=326 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: methionine biosynthetic process [IDA]
    Molecular Function: homocysteine S-methyltransferase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLEKKSALL EDLIKKCGGC AVVDGGFATQ LEIHGAAIND PLWSAVSLIK NPELIKRVHM  60
   61 EYLEAGADIV VTSSYQATIP GFLSRGLSIE ESESLLQKSV ELAVEARDRF WEKVSKVSGH 120
  121 SYNRALVAAS IGSYGAYLAD GSEYSGHYGE NVSLDKLKDF HRRRLQVLVE AGPDLLAFET 180
  181 IPNKLEAQAC VELLEEEKVQ IPAWICFTSV DGEKAPSGES FEECLEPLNK SNNIYAVGIN 240
  241 CAPPQFIENL IRKFAKLTKK AIVVYPNSGE VWDGKAKQWL PSQCFGDDEF EMFATKWRDL 300
  301 GAKLIGGCCR TTPSTINAIS RDLKRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 76.30103 Cobalamin-dependent methionine synthase (MetH) from Thermotoga maritima (Oxidized, Monoclinic)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • S-methyltransferase activity
    		•  3.53817178180686 bayes_pls_golite062009
  • homocysteine S-methyltransferase activity
    		•  2.53321380120921 bayes_pls_golite062009
  • catalytic activity
    		•  1.41033217274476 bayes_pls_golite062009
  • transferase activity
    		•  0.499011632852061 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle