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Protein Overview: gi|41619164, gi|...

General Information:
Name(s) found: gi|41619164 [NCBI NR]
gi|25294102 [NCBI NR]
gi|15221373 [NCBI NR]
gi|12325331 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|41619164|gb|AAS10038.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||H96706 probable transcription factor T22E19.5 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221373|ref|NP_176999.1| MYB62 (myb domain protein 62); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12325331|gb|AAG52612.1|AC016447_21 putative transcription factor; 40023-38981 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    gibberellin biosynthetic process [IMP]
    response to salicylic acid stimulus [IEP]
    cellular response to phosphate starvation [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC  60
   61 RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA QYLPGRTDNE IKNYWRTRVQ 120
  121 KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD 180
  181 SLSMQKDIDY SGFSNIDGSS STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG 240
  241 YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 34.30103 c-Myb, DNA-binding domain
    2 View Details [126..286] MSA 1.59099 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle