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Protein Overview: FHA1_ARATH

General Information:
Name(s) found: FHA1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6642639|gb|AAF20220.1|AC012395_7 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231433|ref|NP_187382.1| forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • FHA domain-containing protein FHA1 OS=Arabidopsis thaliana GN=FHA1 PE=2 SV=1 [Swiss-Prot]
  • (Q9SFV6) T1B9.7 protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|15231433|ref|NP_187382.1| forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Forkhead-associated domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | forkhead-associated domain-containing protein / FHA domain-containing protein | chr3:2309710-2310636 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | SMAD/FHA domain-containing protein | chr3:2309704-2310630 FORWARD LENGTH=251 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • SMAD/FHA domain-containing protein OS=Arabidopsis thaliana GN=T1B9.7 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 251 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVGSGSD VEVGFAKLQG EDFEYYMQSY SIILGRNSKK STVDVDLSSL GGGMNISRNH  60
   61 ARIFYDFTRR RFSLEVLGKN GCFVEGVLHL PGNPNVKLDS QDLLQIGDKE FYFLLPVWSI 120
  121 LGGPLGPRHH VLGKATVVPY HNYHSGPGSG SGKNGVRSRE LYEYDDEDDD EEEDIRGSGK 180
  181 KTWRDGHEGV YASGEKKREG RSKADREADD QQFLQLMHGS GWSVTDIKGV WKRMASQSSK 240
  241 KIPITRRLGY P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 14.69897 Mycobacterium tuberculosis EmbR
    2 View Details [119..251] MSA 1.801988 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.962970280214435 bayes_pls_golite062009
  • protein binding
    		•  0.56456434217804 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle