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Protein Overview: gi|11079523, gi|...

General Information:
Name(s) found: gi|25404170 [NCBI NR]
gi|22330293 [NCBI NR]
gi|22136842 [NCBI NR]
gi|17529088 [NCBI NR]
gi|11079523 [NCBI NR]
Description(s) found:
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  • pir||A96612 hypothetical protein F12K22.18 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22330293|ref|NP_176088.2| amine oxidase family [Arabidopsis thaliana] [NCBI NR]
  • gi|22136842|gb|AAM91765.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17529088|gb|AAL38754.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11079523|gb|AAG29233.1|AC079732_4 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FVR9) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|17529088|gb|AAL38754.1| unknown protein [Arabidopsis thaliana]gi|25404170|pir||A96612 hypothetical protein F12K22.18 [imported] - Arabidopsis thalianagi|11079523|gb|AAG29233.1| hypothetical protein [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • | Symbols: | amine oxidase family | chr1:21398919-21401800 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • FAD binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr1:21395254-21398135 FORWARD LENGTH=574 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • FAD/NAD(P)-binding oxidoreductase domain-containing protein OS=Arabidopsis thaliana GN=F12K22.18 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 574 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: NONE FOUND
    Molecular Function: oxidoreductase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS  60
   61 GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK FDSGPSLFSG LQSRGPQANP 120
  121 LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA 180
  181 ILPLSSAAMA LPPLSIRGDL GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV 240
  241 DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE 300
  301 ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP 360
  361 PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH HIVVNDWDRG VDADQNVVLI 420
  421 SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL 480
  481 GLGFKREKCE VSLVGTPLTH QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF 540
  541 PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..574] PSI-BLAST 44.30103 No description for 2iw5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.03768022092949 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.78682363509228 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle