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Protein Overview: gi|15225046, gi|...

General Information:
Name(s) found: gi|4733959 [NCBI NR]
gi|25300004 [NCBI NR]
gi|15225046 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|4733959|gb|AAD28643.1| similar to glucose inhibited division protein A from prokaryotes [Arabidopsis thaliana] [NCBI NR]
  • pir||G84507 hypothetical protein At2g13440 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15225046|ref|NP_178974.1| glucose-inhibited division family A protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 723 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: tRNA processing [IEA]
    tRNA wobble uridine modification [IEA]
    Molecular Function: FAD binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAAAAATAT VSLRHFRSFP TIVPSLLFSS SSSIPFHSPR LCVFLRPRQL FLNRPLAASF  60
   61 SSSSSGATSD STYDVIVVGA GHAGCEAALA SARLGASTLL LTLNLDRIAW QPCNPAVGGP 120
  121 AKSQLVHEVD ALGGDIGKVA DRCYLQKRIL NVSRGPAVRS LRAQTDKREY ATEMKKIVDS 180
  181 TENLCIREAM VTDIIVGKND NVEGVATFFG MNFYAPSVIL TTGTFMSGKI WVGKKSMPAG 240
  241 RAGESASQGL TENLQKLGFE TDRLKTGTPA RVDRRTIDFS NLEAQHGDEE VSWFSFDPDF 300
  301 HIEREQMCCY LTRTTKITHQ LIRDNLHETP TYGGWVEAKG PRYCPSIEDK IVRFKDKESH 360
  361 QIFLEPEGRD VPEIYVQGFS TGLPENLQLP LLRSLPGLEN CSMLRPAYAV EYDYLPAHQC 420
  421 SRSLMTKKIE GLFFSGQING TTGYEEAAAQ GIISGINAAR HADGKKHVVL ERESSYIGTL 480
  481 IDDLVTKDLR EPYRMLTSRS EHRLLLRFDN ADSRLTPLGR ELGLIDDRRW KLYQEKQARI 540
  541 SEEKKRLKTV KISVAVGDLA AEVSSVSSQP VKESATLESL LKKPHIHYKL LEKHGFGNET 600
  601 LSRMEKDCVE IDIKYEGFIV RQQNQLQQMV HQQHRRLPDD LDYYSMTTLS HEGREKLSKV 660
  661 RPETIGQASR VGGVSPADIT ALLITLESNR RRTQDVKRGK ILEHALAESN PQWVEDREHV 720
  721 VNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..505] PSI-BLAST 30.69897 Dihydrolipoamide dehydrogenase
    2 View Details [506..723] MSA 2.267966 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  4.24087829378489 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  2.84060092432585 bayes_pls_golite062009
  • catalytic activity
    		•  1.56773888754354 bayes_pls_golite062009
  • antioxidant activity
    		•  1.49429830917872 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.39990343076756 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.14701726867934 bayes_pls_golite062009
  • binding
    		•  0.400596507621048 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  0.36771673037999 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.187016999137115 bayes_pls_golite062009
  • protein binding
    		•  0.139858531143419 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle