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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15225046, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAAAAATAT VSLRHFRSFP TIVPSLLFSS SSSIPFHSPR LCVFLRPRQL FLNRPLAASF  60
   61 SSSSSGATSD STYDVIVVGA GHAGCEAALA SARLGASTLL LTLNLDRIAW QPCNPAVGGP 120
  121 AKSQLVHEVD ALGGDIGKVA DRCYLQKRIL NVSRGPAVRS LRAQTDKREY ATEMKKIVDS 180
  181 TENLCIREAM VTDIIVGKND NVEGVATFFG MNFYAPSVIL TTGTFMSGKI WVGKKSMPAG 240
  241 RAGESASQGL TENLQKLGFE TDRLKTGTPA RVDRRTIDFS NLEAQHGDEE VSWFSFDPDF 300
  301 HIEREQMCCY LTRTTKITHQ LIRDNLHETP TYGGWVEAKG PRYCPSIEDK IVRFKDKESH 360
  361 QIFLEPEGRD VPEIYVQGFS TGLPENLQLP LLRSLPGLEN CSMLRPAYAV EYDYLPAHQC 420
  421 SRSLMTKKIE GLFFSGQING TTGYEEAAAQ GIISGINAAR HADGKKHVVL ERESSYIGTL 480
  481 IDDLVTKDLR EPYRMLTSRS EHRLLLRFDN ADSRLTPLGR ELGLIDDRRW KLYQEKQARI 540
  541 SEEKKRLKTV KISVAVGDLA AEVSSVSSQP VKESATLESL LKKPHIHYKL LEKHGFGNET 600
  601 LSRMEKDCVE IDIKYEGFIV RQQNQLQQMV HQQHRRLPDD LDYYSMTTLS HEGREKLSKV 660
  661 RPETIGQASR VGGVSPADIT ALLITLESNR RRTQDVKRGK ILEHALAESN PQWVEDREHV 720
  721 VNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle