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Protein Overview: GH317_ARATH

General Information:
Name(s) found: GH317_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 609 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: auxin homeostasis [TAS]
    response to auxin stimulus [IMP][ISS]
    Molecular Function: indole-3-acetic acid amido synthetase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPSYDPNDT EAGLKLLEDL TTNAEAIQQQ VLHQILSQNS GTQYLRAFLD GEADKNQQSF  60
   61 KNKVPVVNYD DVKPFIQRIA DGESSDIVSA QPITELLTSS GTSAGKPKLM PSTAEELERK 120
  121 TFFYSMLVPI MNKYVDGLDE GKGMYLLFIK PEIKTPSGLM ARPVLTSYYK SQHFRNRPFN 180
  181 KYNVYTSPDQ TILCQDSKQS MYCQLLCGLV QRSHVLRVGA VFASAFLRAV KFLEDHYKEL 240
  241 CADIRTGTVT SWITDSSCRD SVLSILNGPN QELADEIESE CAEKSWEGIL RRIWPKAKYV 300
  301 EVIVTGSMAQ YIPTLEFYSG GLPLVSTMYA SSECYFGINL NPLCDPADVS YTLLPNMAYF 360
  361 EFLPVDDKSH EEIHFATHSN TDDDDDALKE DLIVNLVNVE VGQYYEIVIT TFTGLYRYRV 420
  421 GDILKVTGFH NKAPQFRFVQ RRNVVLSIDT DKTSEEDLLN AVTQAKLNHL QHPSSLLLTE 480
  481 YTSYADTSSI PGHYVLFWEL KPRHSNDPPK LDDKTMEDCC SEVEDCLDYV YRRCRNRDKS 540
  541 IGPLEIRVVS LGTFDSLMDF CVSQGSSLNQ YKTPRCVKSG GALEILDSRV IGRFFSKRVP 600
  601 QWEPLGLDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..609] FFAS03 0.958 Dihydroxybenzoate-AMP ligase DhbE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.927181813624701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle