YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ERF87_ARATH

General Information:
Name(s) found: ERF87_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    ethylene mediated signaling pathway [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK  60
   61 ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP RGSSVTSFVS PDESQRFISE 120
  121 LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH 180
  181 ELPPLPPSTC FGAELRIPET DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS 240
  241 TFFYQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] PSI-BLAST 22.0 GCC-box binding domain
    2 View Details [99..245] PSI-BLAST 15.39794 Solution Structure of the B3 DNA-Binding Domain of RAV1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle