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View Structure Prediction Details

Protein: ERF87_ARATH
Organism: Arabidopsis thaliana
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF87_ARATH.

Description E-value Query
Range
Subject
Range
gi|48479318 - gi|48479318|gb|AAT44930.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana]
229.0 [0..1] [245..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK  60
   61 ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1gccA
Description: GCC-box binding domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [99-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRGSSVTSF VSPDESQRFI SELFNPPSQL EATNSNNNNN NNLYSSTNNQ NQNSIEFSYN  60
   61 GWPQEAECGY QSITSNAEHC DHELPPLPPS TCFGAELRIP ETDSYWNVAH ASIDTFAFEL 120
  121 DGFVDQNSLG QSGTEGFNSL PSTFFYQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.39794
Match: 1widA
Description: Solution Structure of the B3 DNA-Binding Domain of RAV1
Matching Structure (courtesy of the PDB):

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