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Protein Overview: Y1178_ARATH

General Information:
Name(s) found: Y1178_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • BTB/POZ domain-containing protein At1g21780 OS=Arabidopsis thaliana GN=At1g21780 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: Cul3-RING ubiquitin ligase complex [IPI]
    Biological Process: biological_process [ND]
    Molecular Function: protein binding [IPI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDTKVETIS RLAQWRIENF GPCSFKKSDP FKVGIWNWHL SIERNRYLSV RLFPELSRVS  60
   61 KEQPPVAKFV LRVSNVGPNR RFYISPVYEK LLRTTDDCVW HVDSSFHGRF TIDVEFLDLK 120
  121 ICPVNGGEAS PVWPTDATMQ SISTQTTLKC LSRMLEESIL TDVIIHTADG TLSAHKAILS 180
  181 ASSTVFKSMF HHDLMEKESS TIHIDDMSRE SCMALLSYLY GNITQEEFWK HRLALLGAAN 240
  241 KYDITDLKAA CEESLMEDIN SSNVLERLQE AWLYQLEKLK KGCLMYLFDF GKIYDVREEI 300
  301 SSFFRQADRE LMLEMFQEVL SVWKPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] PSI-BLAST 7.69897 Crystal structure of HAUSP
    2 View Details [227..326] PSI-BLAST 5.522879 No description for 2eqxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle