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Protein Overview: GATA6_ARATH

General Information:
Name(s) found: GATA6_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: response to light stimulus [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVELTLKN SNMKDKTLTG GAQNGDDFSV DDLLDFSKEE EDDDVLVEDE AELKVQRKRG  60
   61 VSDENTLHRS NDFSTADFHT SGLSVPMDDI AELEWLSNFV DDSSFTPYSA PTNKPVWLTG 120
  121 NRRHLVQPVK EETCFKSQHP AVKTRPKRAR TGVRVWSHGS QSLTDSSSSS TTSSSSSPRP 180
  181 SSPLWLASGQ FLDEPMTKTQ KKKKVWKNAG QTQTQTQTQT RQCGHCGVQK TPQWRAGPLG 240
  241 AKTLCNACGV RYKSGRLLPE YRPACSPTFS SELHSNHHSK VIEMRRKKET SDGAEETGLN 300
  301 QPVQTVQVVS SF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..200] MSA 1.218989 View MSA. No confident structure predictions are available.
    2 View Details [201..312] PSI-BLAST 12.30103 Erythroid transcription factor GATA-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.270879137859077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle