| Protein: | GATA6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 312 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GATA6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
142.0 | [0..22] | [289..12] |
|
Region A: Residues: [1-200] |
1 11 21 31 41 51
| | | | | |
1 MESVELTLKN SNMKDKTLTG GAQNGDDFSV DDLLDFSKEE EDDDVLVEDE AELKVQRKRG 60
61 VSDENTLHRS NDFSTADFHT SGLSVPMDDI AELEWLSNFV DDSSFTPYSA PTNKPVWLTG 120
121 NRRHLVQPVK EETCFKSQHP AVKTRPKRAR TGVRVWSHGS QSLTDSSSSS TTSSSSSPRP 180
181 SSPLWLASGQ FLDEPMTKTQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [201-312] |
1 11 21 31 41 51
| | | | | |
1 KKKKVWKNAG QTQTQTQTQT RQCGHCGVQK TPQWRAGPLG AKTLCNACGV RYKSGRLLPE 60
61 YRPACSPTFS SELHSNHHSK VIEMRRKKET SDGAEETGLN QPVQTVQVVS SF
|
| Detection Method: | |
| Confidence: | 12.30103 |
| Match: | 2gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.270879137859077 | bayes_pls_golite062009 |
