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Protein Overview: gi|5123705, gi|7...

General Information:
Name(s) found: gi|7484803 [NCBI NR]
gi|7270439 [NCBI NR]
gi|5123705 [NCBI NR]
gi|15236213 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • pir||T10234 amidase homolog T11I11.120 - Arabidopsis thaliana [NCBI NR]
  • gi|7270439|emb|CAB80205.1| amidase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5123705|emb|CAB45449.1| amidase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236213|ref|NP_195214.1| amidase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: amidase activity [ISS]
    carbon-nitrogen ligase activity, with glutamine as amido-N-donor [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK  60
   61 QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL KNTTKLPILH GVPVLLKDSI 120
  121 STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA 180
  181 PSQNSVVGIK PSVGLTSRAG VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT 240
  241 ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI 300
  301 VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL 360
  361 TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV TLGSDLSSVL AIGGYPGINV 420
  421 PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..466] PSI-BLAST 66.0 Peptide amidase Pam

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity
    		•  3.16753436373904 bayes_pls_golite062009
  • glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
    		•  1.35558934074841 bayes_pls_golite062009
  • catalytic activity
    		•  0.906509857495572 bayes_pls_golite062009
  • binding
    		•  0.644139061567672 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.301483171038292 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle