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Protein Overview: DOF34_ARATH

General Information:
Name(s) found: DOF34_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7630027|emb|CAB88324.1| DNA binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|55584036|sp|Q39088.2|DOF34_ARATH RecName: Full=Dof zinc finger protein DOF3.4; Short=AtDOF3.4; AltName: Full=OBF-binding protein 1 [NCBI NR]
  • gi|15229744|ref|NP_190610.1| OBP1 (OBF BINDING PROTEIN 1); DNA binding / protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4 PE=1 SV=2 [Swiss-Prot]
  • (Q9M2R8) DNA binding protein [athaliana3702.FASTAC.txt]
  • DNA binding protein [Arabidopsis thaliana]gi|15229744|ref|NP_190610.1| Dof-type zinc finger domain-containing protein [Arabidopsis thaliana]gi|55584036|sp|Q39088|DF34_ARATH Dof zinc finger protein DOF3.4 (AtDOF3.4) (OBF binding protein 1) [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dof zinc finger protein DOF3.4 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: OBP1 | OBP1 (OBF BINDING PROTEIN 1); DNA binding / transcription factor | chr3:18720853-18721614 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • OBP1; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Dof zinc finger protein DOF3.4 (AtDOF3.4) (OBF-binding protein 1) [nr-271106-contam.fasta]
  • | Symbols: OBP1 | OBF binding protein 1 | chr3:18709872-18710633 FORWARD LENGTH=253 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of transcription [TAS]
    positive regulation of cell cycle [IMP]
    response to salicylic acid stimulus [IEP]
    cell wall modification [IMP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC  60
   61 RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV VSNSNGVPLQ TTPVLFPQSS 120
  121 ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD 180
  181 DVSFGLGRAM WPFSTVGTAT TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW 240
  241 PDLSITTPGN SLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] FFAS03 0.966 No description for 2cklB was found.
    2 View Details [116..253] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.47

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle