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Protein Overview: CHI5_ARATH

General Information:
Name(s) found: CHI5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7288020|emb|CAB81807.1| class IV chitinase (CHIV) [Arabidopsis thaliana] [NCBI NR]
  • gi|51971118|dbj|BAD44251.1| class IV chitinase (CHIV) [Arabidopsis thaliana] [NCBI NR]
  • gi|34146830|gb|AAQ62423.1| At3g54420 [Arabidopsis thaliana] [NCBI NR]
  • gi|15232509|ref|NP_191010.1| ATEP3; chitinase [Arabidopsis thaliana] [NCBI NR]
  • pir||T47601 class IV chitinase (CHIV) - Arabidopsis thaliana [NCBI NR]
  • Endochitinase EP3 OS=Arabidopsis thaliana GN=EP3 PE=1 SV=1 [Swiss-Prot]
  • (Q9M2U5) Class IV chitinase (CHIV) [athaliana3702.FASTAC.txt]
  • At3g54420 [Arabidopsis thaliana]gi|7288020|emb|CAB81807.1| class IV chitinase (CHIV) [Arabidopsis thaliana]gi|51971118|dbj|BAD44251.1| class IV chitinase (CHIV) [Arabidopsis thaliana]gi|15232509|ref|NP_191010.1| class IV chitinase (CHIV) [Arabidopsis t [nrdb_11152004_Chlamydomonas]
  • | Symbols: ATCHITIV, CHIV, ATEP3 | ATEP3 (Arabidopsis thaliana chitinase class IV); chitinase | chr3:20156913-20158012 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • class IV chitinase (CHIV) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATEP3; chitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g54420 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATEP3, ATCHITIV, CHIV, EP3 | homolog of carrot EP3-3 chitinase | chr3:20145935-20147034 FORWARD LENGTH=273 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At3g54420 OS=Arabidopsis thaliana GN=T12E18_110 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    Biological Process: somatic embryogenesis [IEP]
    plant-type hypersensitive response [TAS]
    Molecular Function: chitinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTPTISKSI SLVTILLVLQ AFSNTTKAQN CGCSSELCCS QFGFCGNTSD YCGVGCQQGP  60
   61 CFAPPPANGV SVAEIVTQEF FNGIISQAAS SCAGNRFYSR GAFLEALDSY SRFGRVGSTD 120
  121 DSRREIAAFF AHVTHETGHF CYIEEIDGAS KDYCDENATQ YPCNPNKGYY GRGPIQLSWN 180
  181 FNYGPAGTAI GFDGLNAPET VATDPVISFK TALWYWTNRV QPVISQGFGA TIRAINGALE 240
  241 CDGANTATVQ ARVRYYTDYC RQLGVDPGNN LTC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 73.0 No description for 2dkvA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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