YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|9757959, gi|1...

General Information:
Name(s) found: gi|9757959 [NCBI NR]
gi|15238303 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15238303|ref|NP_199029.1| zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FHX1) TMV resistance protein-like [athaliana3702.FASTAC.txt]
  • TMV resistance protein-like [Arabidopsis thaliana]gi|15238303|ref|NP_199029.1| zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Zinc finger protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein | chr5:16854775-16858868 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • TMV resistance protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:16837547-16841640 REVERSE LENGTH=1073 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain OS=Arabidopsis thaliana GN=At5g42140 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1073 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [ISS]
    Molecular Function: zinc ion binding [ISS]
    phosphoinositide binding [ISS]
    chromatin binding [ISS]
    Ran GTPase binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTRALLYVL QALIALKKGA QLLKYGRKGK PKFCPFRLSN DETSLIWISN GGEKRLKLAT  60
   61 VSKIVPGQRT AVFQRYLRPD KDYLSFSLIY SNRKRTLDLI CKDKVEAEVW IAGLKALISG 120
  121 QAGRSKIDGW SDGGLSIADS RDLTLSSPTN SSVCASRDFN IADSPYNSTN FPRTSRTENS 180
  181 VSSERSHVAS DSPNMLVRGT GSDAFRVSVS SVQSSSSHGS APDDCDALGD VYIWGEVLCE 240
  241 NVTKFGADKN IGYLGSRSDV LIPKPLESNV VLDVHHIACG VKHAALVSRQ GEVFTWGEAS 300
  301 GGRLGHGMGK DVTGPQLIES LAATSIDFVA CGEFHTCAVT MTGEIYTWGD GTHNAGLLGH 360
  361 GTDVSHWIPK RISGPLEGLQ IASVSCGPWH TALITSTGQL FTFGDGTFGV LGHGDKETVF 420
  421 YPREVESLSG LRTIAVACGV WHAAAIVEVI VTHSSSSVSS GKLFTWGDGD KSRLGHGDKE 480
  481 PRLKPTCVSA LIDHTFHRVA CGHSLTVGLT TSGKVYTMGS TVYGQLGNPN ADGKLPCLVE 540
  541 DKLTKDCVEE IACGAYHVAV LTSRNEVFTW GKGANGRLGH GDVEDRKAPT LVDALKERHV 600
  601 KNIACGSNFT AAICLHKWVS GTEQSQCSAC RQAFGFTRKR HNCYNCGLVH CHSCSSKKSL 660
  661 KAALAPNPGK PYRVCDSCHS KLSKVSEANI DSRKNVMPRL SGENKDRLDK TEIRLAKSGI 720
  721 PSNIDLIKQL DNRAARQGKK ADTFSLVRTS QTPLTQLKDA LTNVADLRRG PPKPAVTPSS 780
  781 SRPVSPFSRR SSPPRSVTPI PLNVGLGFST SIAESLKKTN ELLNQEVVRL RAQAESLRHR 840
  841 CEVQEFEVQK SVKKVQEAMS LAAEESAKSE AAKEVIKSLT AQVKDIAALL PPGAYEAETT 900
  901 RTANLLNGFE QNGFHFTNAN GQRQSRSDSM SDTSLASPLA MPARSMNGLW RNSQSPRNTD 960
  961 ASMGELLSEG VRISNGFSED GRNSRSSAAS ASNASQVEAE WIEQYEPGVY ITLLALGDGT1020
 1021 RDLKRVRFSR RRFREQQAET WWSENRERVY EKYNIRGTDR SSVATSPISQ SQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 12.0 STRUCTURE OF THE PLECKSTRIN HOMOLOGY DOMAIN FROM PHOSPHOLIPASE C DELTA IN COMPLEX WITH INOSITOL TRISPHOSPHATE
    2 View Details [129..622] PSI-BLAST 90.30103 Regulator of chromosome condensation RCC1
    3 View Details [623..747] deduced N/A No confident structure predictions are available.
    4 View Details [748..1073] PSI-BLAST 4.0 No description for 2qagC was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle