YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9757959, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTRALLYVL QALIALKKGA QLLKYGRKGK PKFCPFRLSN DETSLIWISN GGEKRLKLAT  60
   61 VSKIVPGQRT AVFQRYLRPD KDYLSFSLIY SNRKRTLDLI CKDKVEAEVW IAGLKALISG 120
  121 QAGRSKIDGW SDGGLSIADS RDLTLSSPTN SSVCASRDFN IADSPYNSTN FPRTSRTENS 180
  181 VSSERSHVAS DSPNMLVRGT GSDAFRVSVS SVQSSSSHGS APDDCDALGD VYIWGEVLCE 240
  241 NVTKFGADKN IGYLGSRSDV LIPKPLESNV VLDVHHIACG VKHAALVSRQ GEVFTWGEAS 300
  301 GGRLGHGMGK DVTGPQLIES LAATSIDFVA CGEFHTCAVT MTGEIYTWGD GTHNAGLLGH 360
  361 GTDVSHWIPK RISGPLEGLQ IASVSCGPWH TALITSTGQL FTFGDGTFGV LGHGDKETVF 420
  421 YPREVESLSG LRTIAVACGV WHAAAIVEVI VTHSSSSVSS GKLFTWGDGD KSRLGHGDKE 480
  481 PRLKPTCVSA LIDHTFHRVA CGHSLTVGLT TSGKVYTMGS TVYGQLGNPN ADGKLPCLVE 540
  541 DKLTKDCVEE IACGAYHVAV LTSRNEVFTW GKGANGRLGH GDVEDRKAPT LVDALKERHV 600
  601 KNIACGSNFT AAICLHKWVS GTEQSQCSAC RQAFGFTRKR HNCYNCGLVH CHSCSSKKSL 660
  661 KAALAPNPGK PYRVCDSCHS KLSKVSEANI DSRKNVMPRL SGENKDRLDK TEIRLAKSGI 720
  721 PSNIDLIKQL DNRAARQGKK ADTFSLVRTS QTPLTQLKDA LTNVADLRRG PPKPAVTPSS 780
  781 SRPVSPFSRR SSPPRSVTPI PLNVGLGFST SIAESLKKTN ELLNQEVVRL RAQAESLRHR 840
  841 CEVQEFEVQK SVKKVQEAMS LAAEESAKSE AAKEVIKSLT AQVKDIAALL PPGAYEAETT 900
  901 RTANLLNGFE QNGFHFTNAN GQRQSRSDSM SDTSLASPLA MPARSMNGLW RNSQSPRNTD 960
  961 ASMGELLSEG VRISNGFSED GRNSRSSAAS ASNASQVEAE WIEQYEPGVY ITLLALGDGT1020
 1021 RDLKRVRFSR RRFREQQAET WWSENRERVY EKYNIRGTDR SSVATSPISQ SQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle