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Protein Overview: GLGB1_ARATH

General Information:
Name(s) found: GLGB1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|4581160|gb|AAD24644.1| starch branching enzyme II [Arabidopsis thaliana] [NCBI NR]
  • pir||B84780 starch branching enzyme II [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2274862|emb|CAA04134.1| Starch branching enzyme II [Arabidopsis thaliana] [NCBI NR]
  • gi|22531146|gb|AAM97077.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15227650|ref|NP_181180.1| SBE2.1 (starch branching enzyme 2.1); 1,4-alpha-glucan branching enzyme [Arabidopsis thaliana] [NCBI NR]
  • gi|110742084|dbj|BAE98973.1| starch branching enzyme class II [Arabidopsis thaliana] [NCBI NR]
  • 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE2.1 PE=2 SV=1 [Swiss-Prot]
  • (O23647) Starch branching enzyme II (EC 2.4.1.18) (1,4-alpha-glucan branching enzyme) (Glycogen branching enzyme) (AMYLO-(1,4 to 1,6)TRANSGLUCOSIDASE) (AMYLO-(1,4-1,6)-transglycosylase) (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|2274862|emb|CAA04134.1| Starch branching enzyme II [Arabidopsis thaliana]gi|4581160|gb|AAD24644.1| starch branching enzyme II [Arabidopsis thaliana]gi|15227650|ref|NP_181180.1| 1,4-alpha-glucan branching enzyme [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 1,4-alpha-glucan branching enzyme [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: BE3, SBE2.1 | SBE2.1 (STARCH BRANCHING ENZYME 2.1); 1,4-alpha-glucan branching enzyme | chr2:15271362-15277019 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SBE2.1 (STARCH BRANCHING ENZYME 2.1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • starch branching enzyme class II [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • starch branching enzyme II [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Starch branching enzyme II [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SBE2.1, BE3 | starch branching enzyme 2.1 | chr2:15264283-15269940 FORWARD LENGTH=858 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE2.1 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 858 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: amylopectin biosynthetic process [TAS]
    starch metabolic process [IMP]
    Molecular Function: 1,4-alpha-glucan branching enzyme activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD  60
   61 SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL GNVDVQKTEE AQETETLDQT 120
  121 SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ 180
  181 YRKLREEIDK NEGGLEAFSR GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD 240
  241 VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY 300
  301 NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG 360
  361 YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS LIDKAHELGL VVLMDIVHSH 420
  421 ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF 480
  481 DGFRFDGVTS MMYTHHGLQV EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG 540
  541 EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK 600
  601 CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG 660
  661 EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD KCRRRFDLGD AEYLRYHGLQ 720
  721 EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS 780
  781 VPGKYKIVLD SDNSLFGGFN RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD 840
  841 DDDERSSLVP IGLLPEDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] deduced N/A No confident structure predictions are available.
    2 View Details [205..858] PSI-BLAST 122.0 1,4-alpha-glucan branching enzyme, N-terminal domain N; 1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching enzyme, central domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle