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Protein Overview: gi|20197333, gi|...

General Information:
Name(s) found: gi|89111928 [NCBI NR]
gi|4432813 [NCBI NR]
gi|41619192 [NCBI NR]
gi|25294093 [NCBI NR]
gi|20197333 [NCBI NR]
gi|15224628 [NCBI NR]
Description(s) found:
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  • gi|89111928|gb|ABD60736.1| At2g31180 [Arabidopsis thaliana] [NCBI NR]
  • gi|4432813|gb|AAD20663.1| myb family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|41619192|gb|AAS10045.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||E84717 probable MYB family transcription factor [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20197333|gb|AAM15030.1| myb DNA-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15224628|ref|NP_180676.1| MYB14 (MYB DOMAIN PROTEIN 14); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • (Q9SJX8) Putative MYB family transcription factor (Myb DNA-binding protein) [athaliana3702.FASTAC.txt]
  • myb family transcription factor [Arabidopsis thaliana]gi|20197333|gb|AAM15030.1| myb DNA-binding protein [Arabidopsis thaliana]gi|15224628|ref|NP_180676.1| myb family transcription factor (MYB14) [Arabidopsis thaliana]gi|41619192|gb|AAS10045.1| MYB tra [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB14) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtMYB14, Myb14at | AtMYB14/Myb14at (myb domain protein 14); DNA binding / transcription factor | chr2:13293883-13295252 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • myb DNA-binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g31180 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • myb family transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATMYB14, MYB14AT, MYB14 | myb domain protein 14 | chr2:13286806-13288175 REVERSE LENGTH=249 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g31180 OS=Arabidopsis thaliana GN=MYB14 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to salt stress [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to jasmonic acid stimulus [IEP]
    response to salicylic acid stimulus [IEP]
    response to ethylene stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY  60
   61 LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLSKNL 120
  121 NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI 180
  181 DDSFWSDVIS VDNSNKNEKK IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI 240
  241 EEFSDIPEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 28.522879 c-Myb, DNA-binding domain
    2 View Details [170..249] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle