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Protein Overview: TBL17_ARATH

General Information:
Name(s) found: TBL17_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9758206|dbj|BAB08680.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|22136926|gb|AAM91807.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19424021|gb|AAL87282.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15242138|ref|NP_199977.1| YLS7 [Arabidopsis thaliana] [NCBI NR]
  • gi|13122292|dbj|BAB32887.1| leaf-senescence-related protein [Arabidopsis thaliana] [NCBI NR]
  • Protein YLS7 OS=Arabidopsis thaliana GN=YLS7 PE=2 SV=1 [Swiss-Prot]
  • (Q9FHM0) Leaf-senescence-related protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|19424021|gb|AAL87282.1| unknown protein [Arabidopsis thaliana]gi|9758206|dbj|BAB08680.1| unnamed protein product [Arabidopsis thaliana]gi|15242138|ref|NP_199977.1| leaf senescence protein-related (YLS7 ) [Arabid [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Leaf senescence protein-related (YLS7 ), annotation temporarily based on supporting cDNA gi:13122291:dbj:AB047810.1: [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: YLS7 | YLS7 (yellow-leaf-specific gene 7) | chr5:20992627-20994604 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • leaf-senescence-related protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • YLS7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: YLS7, TBL17 | Plant protein of unknown function (DUF828) | chr5:20975401-20977378 REVERSE LENGTH=501 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Leaf-senescence-related protein OS=Arabidopsis thaliana GN=YLS7 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: leaf senescence [IEP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLASPRVSN SKTTVLLFPR KVSSIAFAIG GLTSFVIFAS LLLFTYPIGS SVTDYFYRTE  60
   61 TTQNVQFHHS IHDPDRNPSP VSSSESPPVL TQDSDDKVLP KGSHDSNDVR LGEETNSGKS 120
  121 SNVSIDEEAT QDHVETECDL YHGNWFYDPM GPLYTNNSCP LLTQMQNCQG NGRPDKGYEN 180
  181 WRWKPSQCDL PRFDAKKFLE LMRGKTLAFI GDSVARNQME SMMCLLWQVE TPVNRGNRKM 240
  241 QRWYFRSSSV MIARMWSSWL VHQFNEPFGF ATDGVTKLKL DQPDERIIEA LPNFDVVVLS 300
  301 SGHWFAKQSV YILNDQIVGG QLWWPDKSKP EKINNVEAFG ISVETIIKAM AKHPNYTGLT 360
  361 ILRTWSPDHY EGGAWNTGGS CTGKVEPLPP GNLVTNGFTE IMHEKQATGF HRAVADDKLG 420
  421 NRSKKLKLMD ITEAFGYRHD GHPGPYRSPD PKKITKRGPD GQPPPQDCLH WCMPGPVDTW 480
  481 NEMVLEIIRR DFEGRQSSPS S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] deduced N/A No confident structure predictions are available.
    2 View Details [126..247] MSA 5.136968 View MSA. No confident structure predictions are available.
    3 View Details [248..307] MSA 1.137995 View MSA. No confident structure predictions are available.
    4 View Details [308..501] Pfam 72.958607 No description for PF03005.6 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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