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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TBL17_ARATH
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLASPRVSN SKTTVLLFPR KVSSIAFAIG GLTSFVIFAS LLLFTYPIGS SVTDYFYRTE  60
   61 TTQNVQFHHS IHDPDRNPSP VSSSESPPVL TQDSDDKVLP KGSHDSNDVR LGEETNSGKS 120
  121 SNVSIDEEAT QDHVETECDL YHGNWFYDPM GPLYTNNSCP LLTQMQNCQG NGRPDKGYEN 180
  181 WRWKPSQCDL PRFDAKKFLE LMRGKTLAFI GDSVARNQME SMMCLLWQVE TPVNRGNRKM 240
  241 QRWYFRSSSV MIARMWSSWL VHQFNEPFGF ATDGVTKLKL DQPDERIIEA LPNFDVVVLS 300
  301 SGHWFAKQSV YILNDQIVGG QLWWPDKSKP EKINNVEAFG ISVETIIKAM AKHPNYTGLT 360
  361 ILRTWSPDHY EGGAWNTGGS CTGKVEPLPP GNLVTNGFTE IMHEKQATGF HRAVADDKLG 420
  421 NRSKKLKLMD ITEAFGYRHD GHPGPYRSPD PKKITKRGPD GQPPPQDCLH WCMPGPVDTW 480
  481 NEMVLEIIRR DFEGRQSSPS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle