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Protein Overview: gi|15450715, gi|...

General Information:
Name(s) found: gi|20466089 [NCBI NR]
gi|20197236 [NCBI NR]
gi|18403023 [NCBI NR]
gi|15450715 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|20466089|gb|AAM19966.1| At2g32600/T26B15.16 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197236|gb|AAC25942.2| putative spliceosome associated protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18403023|ref|NP_565747.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15450715|gb|AAK96629.1| At2g32600/T26B15.16 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    spliceosomal complex [ISS]
    intracellular [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDREWGSKPG SGGAASGQNE AIDRRERLRR LALETIDLAK DPYFMRNHLG SYECKLCLTL  60
   61 HNNEGNYLAH TQGKRHQTNL AKRAAREAKD APTKPQPLKR NVSVRRTVKI GRPGYRVTKQ 120
  121 YDPELQQRSL LFQIEYPEIE DNIKPRHRFM SSYEQKVQPY DKSYQYLLFA AEPYEIIAFK 180
  181 VPSTEVDKST PKFFSHWDPD SKMFTLQVYF KPTKPEPNKP QSAVGANGLP PPPPPPPHQA 240
  241 QPPPPPPSGL FPPPPPPMAN NGFRPMPPAG GFGHPNM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] FFAS03 0.986 Solution structure of ArfGap domain from human SMAP1
    2 View Details [137..214] deduced N/A No confident structure predictions are available.
    3 View Details [215..277] MSA 10.033997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle