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Protein Overview: gi|15225791, gi|...

General Information:
Name(s) found: gi|91805475 [NCBI NR]
gi|2924782 [NCBI NR]
gi|25408243 [NCBI NR]
gi|15225791 [NCBI NR]
Description(s) found:
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  • gi|91805475|gb|ABE65466.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|2924782|gb|AAC04911.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||C84741 hypothetical protein At2g33090 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15225791|ref|NP_180868.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (O49324) At2g33090 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|25408243|pir||C84741 hypothetical protein At2g33090 [imported] - Arabidopsis thalianagi|15225791|ref|NP_180868.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | binding | chr2:14042292-14043038 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Transcription elongation factor (TFIIS) family protein | chr2:14035215-14035961 REVERSE LENGTH=248 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At2g33090 OS=Arabidopsis thaliana GN=At2g33090 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: transcription [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDHGMFYSS RMSTLSSNGR GDAYTCKKAL HLTLNKPNVV KACSDLKKNE HQISRDFAAE  60
   61 TKKKTEFLVL KKNNDERSKT GEVTREKKQS ALPLKLSKTP RSGTGEIKQT LKKRGLSKSV 120
  121 PETSRLIKLK KQPPVKVSDK PKSCPVLTKN DTDTLELFEI AKKSADFANA KGILASEVET 180
  181 SMCVDTLTLL LEFPISARDM ETRKLMVRLE HLTKHKNRKI CNSASKLLQC WRESIREQQL 240
  241 RESRKTQG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] deduced N/A No confident structure predictions are available.
    2 View Details [148..248] FFAS03 2.46 Solution structure of the N-terminal Domain I of mouse transcription elongation factor S-II protein 3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle