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Protein Overview: gi|9758827, gi|1...

General Information:
Name(s) found: gi|9758827 [NCBI NR]
gi|15238474 [NCBI NR]
gi|124300972 [NCBI NR]
Description(s) found:
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  • gi|9758827|dbj|BAB09499.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15238474|ref|NP_200769.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|124300972|gb|ABN04738.1| At5g59610 [Arabidopsis thaliana] [NCBI NR]
  • (Q9FNA0) Genomic DNA, chromosome 5, P1 clone:MTH12 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15238474|ref|NP_200769.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:24030391-24032180 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:24013165-24014954 FORWARD LENGTH=268 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g59610 OS=Arabidopsis thaliana GN=At5g59610 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 268 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYATSSILSP TPQSFFLSHH LPPISFLYRI NFLGFPVTSC CYGGDIGLAS LYKRRSSIQR  60
   61 RRNRIFVTRA RSSPYEILGV SPSATPQDIK RAYRKLALKY HPDVNKEANA QEKFLKIKHA 120
  121 YTTLINSDSR RKYGSDSRAT GSSTGQTSRK GNSQVEEDFY GLGDFFKDLQ EEYKNWEASA 180
  181 SSQGKPKSLW EELSEIGEEF VEFLEKELNI SDEDNEGSSK NGERFDFEEG STEKSSGKNN 240
  241 SSTKNSIEDN IDEIEATLAQ LKKDLGLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] PSI-BLAST 24.0 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [183..268] PSI-BLAST 15.0 The crystal structure of Hsp40 Ydj1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.36

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle