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Protein Overview: gi|15217972, gi|...

General Information:
Name(s) found: gi|25404217 [NCBI NR]
gi|15217972 [NCBI NR]
gi|12321048 [NCBI NR]
Description(s) found:
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  • pir||D96618 probable peptidylprolyl isomerase F9K23.2 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217972|ref|NP_176141.1| peptidyl-prolyl cis-trans isomerase FKBP-type family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12321048|gb|AAG50644.1|AC082643_8 peptidylprolyl isomerase, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9C650) Peptidylprolyl isomerase, putative [athaliana3702.FASTAC.txt]
  • probable peptidylprolyl isomerase F9K23.2 [imported] - Arabidopsis thalianagi|12321048|gb|AAG50644.1| peptidylprolyl isomerase, putative [Arabidopsis thaliana]gi|15217972|ref|NP_176141.1| peptidyl-prolyl cis-trans isomerase FKBP-type family protein [Ara [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Peptidyl-prolyl cis-trans isomerase FKBP-type family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | peptidyl-prolyl cis-trans isomerase FKBP-type family protein | chr1:21721679-21722581 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • peptidylprolyl isomerase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TPR6 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:21718014-21718916 FORWARD LENGTH=164 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Peptidylprolyl isomerase, putative OS=Arabidopsis thaliana GN=F9K23.2 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 164 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein folding [IEA]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNGEKIEAA NRKKEEGNLL YKTQKYERAA KKYNKAAECI ENGKFEGGDE KQVKALRVSC  60
   61 FLNGAACSLK LKNFLETIVL CSEVLDIEFQ NVKALYRRAQ SYIEVGDLIS AEMDINRALE 120
  121 ADPENREVKS LYKAMKLSKA ESDRRDAKLY ANMFALSKVR THFP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 27.30103 Cyclophilin 40; Cyclophilin 40 isomerase domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle