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Protein Overview: gi|15230094, gi|...

General Information:
Name(s) found: gi|15230094 [NCBI NR]
gi|13477082 [NCBI NR]
Description(s) found:
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  • gi|15230094|ref|NP_189629.1| AAA-type ATPase family [Arabidopsis thaliana] [NCBI NR]
  • gi|13477082|dbj|BAB02995.1| mitochondrial protein-like; contains similarity to AAA-type ATPase [Arabidopsis thaliana] [NCBI NR]
  • (Q9LJ50) Mitochondrial protein-like, contains similarity to AAA-type ATPase [athaliana3702.FASTAC.txt]
  • mitochondrial protein-like; contains similarity to AAA-type ATPase [Arabidopsis thaliana]gi|15230094|ref|NP_189629.1| AAA-type ATPase family [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 AAA-type ATPase family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | AAA-type ATPase family | chr3:11722575-11724582 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP binding / ATPase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • mitochondrial protein-like; contains similarity to AAA-type ATPase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:11720096-11722103 FORWARD LENGTH=440 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AAA-type ATPase family protein OS=Arabidopsis thaliana GN=At3g29800 PE=4 SV=1 [ARATH-contam.fasta]
  • Mitochondrial protein-like contains similarity to AAA-type ATPase OS=Arabidopsis thaliana GN=At3g29800 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: ATPase activity [ISS]
    ATP binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLKLIKSMV QAITRPIQYL IISYLRYLVG PPSLTHHDNQ VTVIIEETSE NGRINVIHGA  60
   61 TQAYLFDKIN LDFVEEREFD DIYQGAKLKW RIFVDKNNIG NIPKQCFELR FDEKHRDLVF 120
  121 DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD 180
  181 IDLFISKEDF YKRVGRHWMR YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT 240
  241 RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ 300
  301 TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE 360
  361 ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK NSNLDSKPRK SQTIIVEALN 420
  421 QVRCNETETG SNIDYSSNEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 67.69897 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle