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Protein Overview: YSL5_ARATH

General Information:
Name(s) found: YSL5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294153|dbj|BAB02055.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|75274260|sp|Q9LUN2.1|YSL5_ARATH RecName: Full=Probable metal-nicotianamine transporter YSL5; AltName: Full=Protein YELLOW STRIPE LIKE 5; Short=AtYSL5 [NCBI NR]
  • gi|41352043|gb|AAS00694.1| metal-nicotianamine transporter YSL5 [Arabidopsis thaliana] [NCBI NR]
  • gi|18401590|ref|NP_566584.1| YSL5 (YELLOW STRIPE LIKE 5); oligopeptide transporter [Arabidopsis thaliana] [NCBI NR]
  • Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE=1 SV=1 [Swiss-Prot]
  • (Q9LUN2) Gb|AAD49762.1 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|18401590|ref|NP_566584.1| oligopeptide transporter OPT family protein [Arabidopsis thaliana]gi|41352043|gb|AAS00694.1| metal-nicotianamine transporter YSL5 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oligopeptide transporter OPT family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PDE321, YSL5 | YSL5 (YELLOW STRIPE LIKE 5); oligopeptide transporter | chr3:6034313-6037093 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • PDE321; oligopeptide transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • metal-nicotianamine transporter YSL5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: YSL5, PDE321 | YELLOW STRIPE like 5 | chr3:6034307-6037087 FORWARD LENGTH=714 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 714 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: oligopeptide transport [ISS]
    Molecular Function: oligopeptide transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGVLNPDR DRQIVEHELQ ETGFSPETEK VKNKNFEEDE EEEDESVEKI FESREVPSWK  60
   61 KQLTVRAFVV SFMLSILFSF IVMKLNLTTG IIPSLNVSAG LLGFFFVKTW TKMLHRSGLL 120
  121 KQPFTRQENT VIQTCVVASS GIAFSGGFGT YLFGMSERIA TQSGDVSRGV KDPSLGWIIG 180
  181 FLFVVSFLGL FSVVPLRKIM VIDFKLTYPS GTATAHLINS FHTPQGAKLA KKQVRVLGKF 240
  241 FSLSFFWSFF QWFFTGGENC GFSNFPTFGL KAYQYKFYFD FSATYVGVGM ICPYIINISV 300
  301 LLGGILSWGI MWPLIETKKG DWFPDNVPSS SMHGLQAYKV FIAVAIILGD GLYNFCKVLS 360
  361 RTLSGLFVQL RGPTTSISRT SFTLEEDPHA SPLSPKQSYD DQRRTRFFLK DQIPTWFAVG 420
  421 GYITIAATST AILPHMFHQL RWYYILVIYI CAPVLAFCNA YGAGLTDWSL ASTYGKLAIF 480
  481 TIGAWAGSEH GGMLAGLAAC GVMMNIVSTA SDLTQDFKTG YLTLSSPKSM FVSQVIGTAM 540
  541 GCVVSPCVFW LFYKAFDDLG LPNTEYPAPF ATVYRSMAKL GVEGVASLPR ECLVLCYAFF 600
  601 GVAILVNIVK DSLHSNWGRF IPLPMAMAIP FFLGPYFAID MCVGSLILFI WERVDAAKAE 660
  661 AFGTAVASGL ICGDGIWSLP SSVLAIAGVN PPVCMKFLSS ATNSKVDNFL KGSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] MSA 1.107981 View MSA. No confident structure predictions are available.
    2 View Details [149..389] MSA 1.112957 View MSA. No confident structure predictions are available.
    3 View Details [390..490] deduced N/A No confident structure predictions are available.
    4 View Details [491..532] MSA 2.115995 View MSA. No confident structure predictions are available.
    5 View Details [533..714] MSA 2.115988 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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