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Protein Overview: gi|41619210, gi|...

General Information:
Name(s) found: gi|541881 [NCBI NR]
gi|506189 [NCBI NR]
gi|44681444 [NCBI NR]
gi|41619210 [NCBI NR]
gi|38603964 [NCBI NR]
gi|2275197 [NCBI NR]
gi|15226524 [NCBI NR]
gi|14970986 [NCBI NR]
gi|110738166 [NCBI NR]
Description(s) found:
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  • pir||JQ2390 MYB transcription factor (Atmyb2) [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|506189|dbj|BAA03534.1| ATMYB2 [Arabidopsis thaliana] [NCBI NR]
  • gi|44681444|gb|AAS47662.1| At2g47190 [Arabidopsis thaliana] [NCBI NR]
  • gi|41619210|gb|AAS10049.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|38603964|gb|AAR24727.1| At2g47190 [Arabidopsis thaliana] [NCBI NR]
  • gi|2275197|gb|AAB63819.1| MYB transcription factor (Atmyb2) [Arabidopsis thaliana] [NCBI NR]
  • gi|15226524|ref|NP_182241.1| MYB2 (MYB DOMAIN PROTEIN 2); DNA binding / calmodulin binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|14970986|dbj|BAB62128.1| MYB transcription factor Atmyb2 [Arabidopsis thaliana] [NCBI NR]
  • gi|110738166|dbj|BAF01014.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • (Q39028) ATMYB2 (MYB transcription factor ATMYB2) [athaliana3702.FASTAC.txt]
  • At2g47190 [Arabidopsis thaliana]gi|506189|dbj|BAA03534.1| ATMYB2 [Arabidopsis thaliana]gi|2275197|gb|AAB63819.1| MYB transcription factor (Atmyb2) [Arabidopsis thaliana]gi|14970986|dbj|BAB62128.1| MYB transcription factor Atmyb2 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB2) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATMYB2, MYB2 | MYB2 (myb domain protein 2); DNA binding / transcription factor | chr2:19383354-19384367 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • MYB transcription factor (Atmyb2) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB2; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g47190 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB transcription factor Atmyb2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATMYB2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATMYB2, MYB2 | myb domain protein 2 | chr2:19376284-19377297 FORWARD LENGTH=273 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ATMYB2 OS=Arabidopsis thaliana GN=Atmyb2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to abscisic acid stimulus [IEP][IMP]
    response to salt stress [IEP]
    response to cadmium ion [IEP]
    response to salicylic acid stimulus [IEP]
    response to ethylene stimulus [IEP]
    response to water deprivation [IEP]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [ISS]
    calmodulin binding [IDA]
    transcription activator activity [IEP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDYERINSN SPTHEEDSDV RKGPWTEEED AILVNFVSIH GDARWNHIAR SSGLKRTGKS  60
   61 CRLRWLNYLR PDVRRGNITL EEQFMILKLH SLWGNRWSKI AQYLPGRTDN EIKNYWRTRV 120
  121 QKQAKHLRCD VNSNLFKETM RNVWMPRLVE RINAQSLPTT CEQVESMITD PSQPVNEPSP 180
  181 VEPGFVQFSQ NHHQQFVPAT ELSATSSNSP AETFSDVRGG VVNGSGYDPS GQTGFGEFND 240
  241 WGCVGGDNMW TDEESFWFLQ DQFCPDTTSY SYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] PSI-BLAST 35.39794 c-Myb, DNA-binding domain
    2 View Details [179..273] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle