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Protein Overview: gi|8978341, gi|1...

General Information:
Name(s) found: gi|8978341 [NCBI NR]
gi|55733743 [NCBI NR]
gi|53749132 [NCBI NR]
gi|15238956 [NCBI NR]
gi|110742181 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|8978341|dbj|BAA98194.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|55733743|gb|AAV59268.1| At5g48370 [Arabidopsis thaliana] [NCBI NR]
  • gi|53749132|gb|AAU90051.1| At5g48370 [Arabidopsis thaliana] [NCBI NR]
  • gi|15238956|ref|NP_199648.1| thioesterase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110742181|dbj|BAE99018.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    Biological Process: NONE FOUND
    Molecular Function: hydrolase activity, acting on ester bonds [ISS]
    acyl-CoA thioesterase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPRPISVV STFASPSSTS DPTRKPLSLW PGMYHSPVTT ALWEARSKIF ESLLDPPKDA  60
   61 PPQSQLLTRT PSHSRTTIFY PFSTDFILRE QYRDPWNEVR IGILLEDLDA LAGTISVKHC 120
  121 SDDDSTTRPL LLVTASVHKI VLKKPICVDI DLKIVASVIW VGRSSIEIQL EVMQSELKDV 180
  181 KASSDSVALT ANFIFVARDS KTGKAAPINR LSPETEVEKL LFEEAEARNN LRKKKRGGDR 240
  241 REFDHGECKK LEAWLAEGRI FSDMPALADR NSILLKDTRL ENSLICQPQQ RNIHGRIFGG 300
  301 FLMHRAFELA FSTAYTFAGL VPYFLEVDHV DFLRPVDVGD FLRFKSCVLY TQLDKQDCPL 360
  361 INIEVVAHVT SPEIRSSEVS NTFYFKFTVR PEAKARNNGF KLRNVVPATE EEARHILERM 420
  421 DAEALKSSKQ QCVGTILQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] PSI-BLAST 27.69897 No description for 2gvhA was found.
    2 View Details [210..438] PSI-BLAST 37.39794 No description for 2q2bA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.215996736903871 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle